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Title: Nucleotide binding to human UMP-CMP kinase using fluorescent derivatives -- a screening based on affinity for the UMP-CMP binding site.
Journal: The FEBS journal 20070701
Title: Novel azalides derived from sixteen-membered macrolides.
Journal: The Journal of antibiotics 20070701
Title: Sendai virus RNA polymerase scanning for mRNA start sites at gene junctions.
Journal: Virology 20070605
Title: Picornavirus genome replication: assembly and organization of the VPg uridylylation ribonucleoprotein (initiation) complex.
Journal: The Journal of biological chemistry 20070601
Title: RNA-editing-associated protein 1 null mutant reveals link to mitochondrial RNA stability.
Journal: RNA (New York, N.Y.) 20070601
Title: Identification of quorum sensing-related regulons in Vibrio vulnificus by two-dimensional gel electrophoresis and differentially displayed reverse transcriptase PCR.
Journal: FEMS immunology and medical microbiology 20070601
Title: Efficient RNA polyuridylation by noncanonical poly(A) polymerases.
Journal: Molecular and cellular biology 20070501
Title: Structure-function analysis of glutamine synthetase adenylyltransferase (ATase, EC 2.7.7.49) of Escherichia coli.
Journal: Biochemistry 20070403
Title: Modulation of mRNA stability as a novel therapeutic approach.
Journal: Pharmacology & therapeutics 20070401
Title: The role of Ureaplasma nucleoside monophosphate kinases in the synthesis of nucleoside triphosphates.
Journal: The FEBS journal 20070401
Title: Structural and enzymatic investigation of the Sulfolobus solfataricus uridylate kinase shows competitive UTP inhibition and the lack of GTP stimulation.
Journal: Biochemistry 20070313
Title: Regulatory mechanisms differ in UMP kinases from gram-negative and gram-positive bacteria.
Journal: The Journal of biological chemistry 20070309
Title: A potent, covalent inhibitor of orotidine 5'-monophosphate decarboxylase with antimalarial activity.
Journal: Journal of medicinal chemistry 20070308
Title: Dietary supplementation with uridine-5'-monophosphate (UMP), a membrane phosphatide precursor, increases acetylcholine level and release in striatum of aged rat.
Journal: Brain research 20070216
Title: The RNA-binding protein HuD binds acetylcholinesterase mRNA in neurons and regulates its expression after axotomy.
Journal: The Journal of neuroscience : the official journal of the Society for Neuroscience 20070117
Title: Enhanced production of scleroglucan by Sclerotium rolfsii MTCC 2156 by use of metabolic precursors.
Journal: Bioresource technology 20070101
Title: Influence of hyaluronic acid synthesis and cumulus mucification on bovine oocyte in vitro maturation, fertilisation and embryo development.
Journal: Reproduction, fertility, and development 20070101
Title: Expression of RNA virus proteins by RNA polymerase II dependent expression plasmids is hindered at multiple steps.
Journal: Virology journal 20070101
Title: RNA-protein interactions in assembled editing complexes in trypanosomes.
Journal: Methods in enzymology 20070101
Title: Synthesis and structure-activity relationships of uracil nucleotide derivatives and analogues as agonists at human P2Y2, P2Y4, and P2Y6 receptors.
Journal: Journal of medicinal chemistry 20061130
Title: Fragment-based screening of the donor substrate specificity of human blood group B galactosyltransferase using saturation transfer difference NMR.
Journal: The Journal of biological chemistry 20061027
Title: On-line enhancement technique for the analysis of nucleotides using capillary zone electrophoresis/mass spectrometry.
Journal: Analytical chemistry 20060915
Title: Structure-activity relationships of uridine 5'-diphosphate analogues at the human P2Y6 receptor.
Journal: Journal of medicinal chemistry 20060907
Title: RNA recognition and cleavage by the SARS coronavirus endoribonuclease.
Journal: Journal of molecular biology 20060811
Title: Design of inhibitors of orotidine monophosphate decarboxylase using bioisosteric replacement and determination of inhibition kinetics.
Journal: Journal of medicinal chemistry 20060810
Title: Oral administration of uridylic acid increases plasma leptin, but suppresses glucose and non-esterified fatty acid concentrations in rats.
Journal: Life sciences 20060704
Title: The cardioprotective effect of uridine and uridine-5'-monophosphate: the role of the mitochondrial ATP-dependent potassium channel.
Journal: Experimental gerontology 20060701
Title: Molecular dynamics DFT:B3LYP study of guanosinetriphosphate conversion into guanosinemonophosphate upon Mg2+ chelation of alpha and beta phosphate oxygens of the triphosphate tail.
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Title: Reversible photocontrol of deoxyribozyme-catalyzed RNA cleavage under multiple-turnover conditions.
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Title: KREPA4, an RNA binding protein essential for editosome integrity and survival of Trypanosoma brucei.
Journal: RNA (New York, N.Y.) 20060501
Title: Half-of-sites binding of orotidine 5'-phosphate and alpha-D-5-phosphorylribose 1-diphosphate to orotate phosphoribosyltransferase from Saccharomyces cerevisiae supports a novel variant of the Theorell-Chance mechanism with alternating site catalysis.
Journal: Biochemistry 20060425
Title: Acid-base properties of the nucleic-acid model 2'-deoxyguanylyl(5'-->3')-2'-deoxy-5'-guanylate, d(pGpG)3-, and of related guanine derivatives.
Journal: Organic & biomolecular chemistry 20060321
Title: Substrate specificity of an active dinuclear Zn(II) catalyst for cleavage of RNA analogues and a dinucleoside.
Journal: Journal of the American Chemical Society 20060208
Title: Involvement of oxidative stress induction in Na+ toxicity and its relation to the inhibition of a Ca2+ -dependent but calcineurin-independent mechanism in Saccharomyces cerevisiae.
Journal: Journal of bioscience and bioengineering 20060101
Title: A multispecies comparison of the metazoan 3'-processing downstream elements and the CstF-64 RNA recognition motif.
Journal: BMC genomics 20060101
Title: Design, synthesis and structural analysis of novel bent DNAs containing cyclic uridylate dimer analogues.
Journal: Nucleic acids symposium series (2004) 20060101
Title: Structural basis for UTP specificity of RNA editing TUTases from Trypanosoma brucei.
Journal: The EMBO journal 20051207
Title: Synthesis and antiviral activity of aryl phosphoramidate derivatives of beta-D- and beta-L-C-5-substituted 2',3'-didehydro-2',3'-dideoxy-uridine bearing linker arms.
Journal: Journal of enzyme inhibition and medicinal chemistry 20051201
Title: Mutational analysis of the SARS virus Nsp15 endoribonuclease: identification of residues affecting hexamer formation.
Journal: Journal of molecular biology 20051111
Title: Combinatorial multinuclear NMR and X-ray diffraction studies of uranium(VI)-nucleotide complexes.
Journal: Journal of the American Chemical Society 20051102
Title: 3'-Enolpyruvyl-UMP, a novel and unexpected metabolite in nikkomycin biosynthesis.
Journal: Chembiochem : a European journal of chemical biology 20051101
Title: Hepatitis C virus nonstructural protein 5A (NS5A) is an RNA-binding protein.
Journal: The Journal of biological chemistry 20051028
Title: Oral uridine-5'-monophosphate (UMP) increases brain CDP-choline levels in gerbils.
Journal: Brain research 20051005
Title: High NaCl increases TonEBP/OREBP mRNA and protein by stabilizing its mRNA.
Journal: American journal of physiology. Renal physiology 20051001
Title: The crystal structure of Pyrococcus furiosus UMP kinase provides insight into catalysis and regulation in microbial pyrimidine nucleotide biosynthesis.
Journal: Journal of molecular biology 20050916
Title: Structure of Escherichia coli UMP kinase differs from that of other nucleoside monophosphate kinases and sheds new light on enzyme regulation.
Journal: The Journal of biological chemistry 20050708
Title: Acid-base and metal-ion binding properties of the RNA dinucleotide uridylyl-(5'-->3')-[5']uridylate (pUpU3-).
Journal: Chemistry (Weinheim an der Bergstrasse, Germany) 20050704
Title: Effects of 5'-uridylic acid feeding on postprandial plasma concentrations of GH, insulin and metabolites in young calves.
Journal: The Journal of endocrinology 20050701
Title: Structure of pyrR (Rv1379) from Mycobacterium tuberculosis: a persistence gene and protein drug target.
Journal: Acta crystallographica. Section D, Biological crystallography 20050401
Title: Bis(carbamoyloxymethyl) esters of 2',3'-dideoxyuridine 5'-monophosphate (ddUMP) as potential ddUMP prodrugs.
Journal: Pharmaceutical research 20050301
Title: A novel enzyme complex of orotate phosphoribosyltransferase and orotidine 5'-monophosphate decarboxylase in human malaria parasite Plasmodium falciparum: physical association, kinetics, and inhibition characterization.
Journal: Biochemistry 20050208
Title: AU-rich transient response transcripts in the human genome: expressed sequence tag clustering and gene discovery approach.
Journal: Genomics 20050201
Title: Effects of phosphate limitation on expression of genes involved in pyrimidine synthesis and salvaging in Arabidopsis.
Journal: Plant physiology and biochemistry : PPB 20050201
Title: A comprehensive update of the sequence and structure classification of kinases.
Journal: BMC structural biology 20050101
Title: Two cis-acting elements in negative RNA strand of Hepatitis C virus involved in synthesis of positive RNA strand in vitro.
Journal: Acta virologica 20050101
Title: Dietary uridine-5'-monophosphate supplementation increases potassium-evoked dopamine release and promotes neurite outgrowth in aged rats.
Journal: Journal of molecular neuroscience : MN 20050101
Title: Protein-protein interactions of the hyperthermophilic archaeon Pyrococcus horikoshii OT3.
Journal: Genome biology 20050101
Title: Characterization of ligand binding to the bifunctional key enzyme in the sialic acid biosynthesis by NMR: I. Investigation of the UDP-GlcNAc 2-epimerase functionality.
Journal: The Journal of biological chemistry 20041231
Title: UMP kinase from Streptococcus pneumoniae: evidence for co-operative ATP binding and allosteric regulation.
Journal: The Biochemical journal 20041215
Title: A proficient enzyme: insights on the mechanism of orotidine monophosphate decarboxylase from computer simulations.
Journal: Journal of the American Chemical Society 20041208
Title: Primordial germ cell migration in the rat: preliminary evidence for a role of galactosyltransferase.
Journal: Biology of reproduction 20041201
Title: The cyanobacterial toxin cylindrospermopsin inhibits pyrimidine nucleotide synthesis and alters cholesterol distribution in mice.
Journal: Toxicological sciences : an official journal of the Society of Toxicology 20041201
Title: OMP decarboxylase: an experimental test of electrostatic destabilization of the enzyme-substrate complex.
Journal: Journal of the American Chemical Society 20041117
Title: Synthesis of a bisubstrate-type inhibitor of N-acetylglucosaminyltransferases.
Journal: Angewandte Chemie (International ed. in English) 20041025
Title: Long-range allosteric transitions in carbamoyl phosphate synthetase.
Journal: Protein science : a publication of the Protein Society 20040901
Title: UDP-galactose 4-epimerase from Kluyveromyces fragilis: analysis of its hysteretic behavior during catalysis.
Journal: Biochemistry 20040810
Title: Compelling evidence for a stepwise mechanism of the alkaline cyclisation of uridine 3'-phosphate esters.
Journal: Organic & biomolecular chemistry 20040807
Title: Substrate-induced conformational changes in human UMP/CMP kinase.
Journal: The Journal of biological chemistry 20040806
Title: One-pot enzymatic synthesis of UDP-D-glucose from UMP and glucose-1-phosphate using an ATP regeneration system.
Journal: Journal of biochemistry and molecular biology 20040731
Title: Orotate phosphoribosyltransferase and orotidine 5'-monophosphate decarboxylase exist as multienzyme complex in human malaria parasite Plasmodium falciparum.
Journal: Biochemical and biophysical research communications 20040611
Title: Complete cycles of bloodstream trypanosome RNA editing in vitro.
Journal: RNA (New York, N.Y.) 20040601
Title: Nucleotides in sow colostrum and milk at different stages of lactation.
Journal: Journal of animal science 20040501
Title: cis-acting elements at opposite ends of the Citrus tristeza virus genome differ in initiation and termination of subgenomic RNAs.
Journal: Virology 20040425
Title: The effect of alpha-amanitin on the Arabidopsis seed proteome highlights the distinct roles of stored and neosynthesized mRNAs during germination.
Journal: Plant physiology 20040401
Title: UDPgalactose 4-epimerase from Saccharomyces cerevisiae. A bifunctional enzyme with aldose 1-epimerase activity.
Journal: European journal of biochemistry 20040201
Title: Negative ion FAB mass spectroscopy of some ribose alkylated 5'-UMP derivatives.
Journal: Natural product research 20040201
Title: Regulation of pyrimidine nucleotide formation in Pseudomonas reptilivora.
Journal: Letters in applied microbiology 20040101
Title: Effect of mutation in the hepatitis C virus nonstructural 5B region on HCV replication.
Journal: Journal of gastroenterology 20040101
Title: Fermentative production of curdlan.
Journal: Applied biochemistry and biotechnology 20040101
Title: Reconstruction of ancestral protein sequences and its applications.
Journal: BMC evolutionary biology 20040101
Title: Biochemical properties of full-length hepatitis C virus RNA-dependent RNA polymerase expressed in insect cells.
Journal: Experimental & molecular medicine 20031231
Title: Cis-acting elements stimulating kinetoplastid guide RNA-directed editing.
Journal: The Journal of biological chemistry 20031219
Title: A 'slide-back' mechanism for the initiation of protein-primed RNA synthesis by the RNA polymerase of poliovirus.
Journal: The Journal of biological chemistry 20031107
Title: Non-covalent and coordination interactions in Cu(II) systems with uridine, uridine 5'-monophosphate and triamine or tetramine as biogenic amine analogues in aqueous solutions.
Journal: Journal of inorganic biochemistry 20031001
Title: Status of the 'protein kinase CK2-HMG14' system in age-related amnesia in rats.
Journal: Neuroscience and behavioral physiology 20031001
Title: The poliovirus 2C cis-acting replication element-mediated uridylylation of VPg is not required for synthesis of negative-sense genomes.
Journal: The Journal of general virology 20030901
Title: Complex formation of divalent metal ions with uridine 5'-O-thiomonophosphate or methyl thiophosphate: comparison of complex stabilities with those of the parent phosphate ligands.
Journal: Chembiochem : a European journal of chemical biology 20030707
Title: Photodetachment of zwitterions: probing intramolecular Coulomb repulsion and attraction in the gas phase using mono-decarboxylated pyridinium dicarboxylates. Implications on the mechanism of orotidine 5'-monophosphate decarboxylase.
Journal: Journal of the American Chemical Society 20030604
Title: The DNA excision repair system of the highly radioresistant bacterium Deinococcus radiodurans is facilitated by the pentose phosphate pathway.
Journal: Molecular microbiology 20030601
Title: TbMP57 is a 3' terminal uridylyl transferase (TUTase) of the Trypanosoma brucei editosome.
Journal: Molecular cell 20030601
Title: Hydrogen isotope tracing in the reaction of orotidine-5'-monophosphate decarboxylase.
Journal: Archives of biochemistry and biophysics 20030415
Title: Pseudouridylation (Psi) of U2 snRNA in S. cerevisiae is catalyzed by an RNA-independent mechanism.
Journal: The EMBO journal 20030415
Title: Reaction of human UMP-CMP kinase with natural and analog substrates.
Journal: European journal of biochemistry 20030401
Title: Catalysis by enzyme conformational change as illustrated by orotidine 5'-monophosphate decarboxylase.
Journal: Current opinion in structural biology 20030401
Title: Kinetic studies of the uracil phosphoribosyltransferase reaction catalyzed by the Bacillus subtilis pyrimidine attenuation regulatory protein PyrR.
Journal: The Journal of biological chemistry 20030227
Title: Copper(II) complexes with uridine, uridine 5'-monophosphate, spermidine, or spermine in aqueous solution.
Journal: Journal of inorganic biochemistry 20030115
Title: Microarray analysis of orthologous genes: conservation of the translational machinery across species at the sequence and expression level.
Journal: Genome biology 20030101
Title: Equilibrium of formation of the 6-carbanion of UMP, a potential intermediate in the action of OMP decarboxylase.
Journal: Journal of the American Chemical Society 20021127
Title: Translational regulation of prostaglandin endoperoxide H synthase-1 mRNA in megakaryocytic MEG-01 cells. Specific protein binding to a conserved 20-nucleotide CIS element in the 3'-untranslated region.
Journal: The Journal of biological chemistry 20021122
Title: Unmasking a functional allosteric domain in an allosterically nonresponsive carbamoyl-phosphate synthetase.
Journal: The Journal of biological chemistry 20021122
Title: Analgesic effects of intrathecal administration of P2Y nucleotide receptor agonists UTP and UDP in normal and neuropathic pain model rats.
Journal: The Journal of pharmacology and experimental therapeutics 20021001
Title: An investigation of orotic acid levels in the breastmilk of smoking and non-smoking mothers.
Journal: European journal of clinical nutrition 20021001
Title: Profiles of pyrimidine biosynthesis, salvage and degradation in disks of potato (Solanum tuberosum L.) tubers.
Journal: Planta 20020901
Title: Crystal structures of inhibitor complexes reveal an alternate binding mode in orotidine-5'-monophosphate decarboxylase.
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Title: RNA editing: complexity and complications.
Journal: Molecular microbiology 20020801
Title: Montmorillonite catalysis of 30-50 mer oligonucleotides: laboratory demonstration of potential steps in the origin of the RNA world.
Journal: Origins of life and evolution of the biosphere : the journal of the International Society for the Study of the Origin of Life 20020801
Title: An alternative flavin-dependent mechanism for thymidylate synthesis.
Journal: Science (New York, N.Y.) 20020705
Title: Cajal body-specific small nuclear RNAs: a novel class of 2'-O-methylation and pseudouridylation guide RNAs.
Journal: The EMBO journal 20020603
Title: Structure of product-bound Bacillus caldolyticus uracil phosphoribosyltransferase confirms ordered sequential substrate binding.
Journal: Acta crystallographica. Section D, Biological crystallography 20020601
Title: Detection and location of the enzymes of de novo pyrimidine biosynthesis in mammalian spermatozoa.
Journal: Reproduction (Cambridge, England) 20020601
Title: Substrate binding induces domain movements in orotidine 5'-monophosphate decarboxylase.
Journal: Journal of molecular biology 20020510
Title: Structure of the 16S rRNA pseudouridine synthase RsuA bound to uracil and UMP.
Journal: Nature structural biology 20020501
Title: Formation and structure of a novel enediyne-RNA base covalent adduct.
Journal: Journal of the American Chemical Society 20020403
Title: A hammerhead ribozyme substrate and reporter for in vitro kinetoplastid RNA editing.
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Title: Density functional models of the mechanism for decarboxylation in orotidine decarboxylase.
Journal: Journal of molecular modeling 20020401
Title: Enzymatic activities of Ura2 and Ura1 proteins (aspartate carbamoyltransferase and dihydro-orotate dehydrogenase) are present in both isolated membranes and cytoplasm of Saccharomyces cerevisiae.
Journal: Yeast (Chichester, England) 20020330
Title: Membrane sequestration of the signal transduction protein GlnK by the ammonium transporter AmtB.
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Title: Role of uridylate-specific exoribonuclease activity in Trypanosoma brucei RNA editing.
Journal: Eukaryotic cell 20020201
Title: Mechanism of oligomerization of Escherichia coli carbamoyl phosphate synthetase and modulation by the allosteric effectors. A site-directed mutagenesis study.
Journal: FEBS letters 20020130
Title: Composition of the editing complex of Trypanosoma brucei.
Journal: Philosophical transactions of the Royal Society of London. Series B, Biological sciences 20020129
Title: Electrospray ionization mass spectrometry of serine/alanine conjugated 5'-UMP and 3',5'-dithymidine phosphoramidates.
Journal: Rapid communications in mass spectrometry : RCM 20020101
Title: Methylenetetrahydrofolate reductase polymorphism and susceptibility to breast cancer.
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Title: Prebiotic synthesis of nucleotides at the Earth orbit in presence of Lunar soil.
Journal: Advances in space research : the official journal of the Committee on Space Research (COSPAR) 20020101
Title: An alternative explanation for the catalytic proficiency of orotidine 5'-phosphate decarboxylase.
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Title: Synthesis and biological studies of novel nucleoside phosphoramidate prodrugs.
Journal: Journal of medicinal chemistry 20011206
Title: The specificity of nucleotide removal during RNA editing in Trypanosoma brucei.
Journal: RNA (New York, N.Y.) 20011201
Title: Inhibition of CMP-sialic acid transport into Golgi vesicles by nucleoside monophosphates.
Journal: Biochemistry 20011127
Title: Characterization of human UMP-CMP kinase enzymatic activity and 5' untranslated region.
Journal: Life sciences 20011005
Title: Allosteric control of the oligomerization of carbamoyl phosphate synthetase from Escherichia coli.
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Title: Roles for ligases in the RNA editing complex of Trypanosoma brucei: band IV is needed for U-deletion and RNA repair.
Journal: The EMBO journal 20010903
Title: Improved chemical synthesis of UDP-galactofuranose.
Journal: Organic letters 20010809
Title: Identification of the amino acid residue involved in rabbit hemorrhagic disease virus VPg uridylylation.
Journal: The Journal of biological chemistry 20010727
Title: Role of enzyme-ribofuranosyl contacts in the ground state and transition state for orotidine 5'-phosphate decarboxylase: a role for substrate destabilization?
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Title: Liquid-core waveguide technology for coupling column liquid chromatography and Raman spectroscopy.
Journal: Journal of chromatography. A 20010518
Title: Contribution of the active site histidine residues of ribonuclease A to nucleic acid binding.
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Title: A reexamination of the substrate utilization of 2-thioorotidine-5'-monophosphate by yeast orotidine-5'-monophosphate decarboxylase.
Journal: Bioorganic chemistry 20010401
Title: Uridylylation of the PII protein from Herbaspirillum seropedicae.
Journal: Canadian journal of microbiology 20010401
Title: Annealing of RNA editing substrates facilitated by guide RNA-binding protein gBP21.
Journal: The EMBO journal 20010315
Title: A small nucleolar guide RNA functions both in 2'-O-ribose methylation and pseudouridylation of the U5 spliceosomal RNA.
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Title: Synthesis of 6-formyluridine 5'-monophosphate: 6-formyl-UMP.
Journal: Nucleosides, nucleotides & nucleic acids 20010101
Title: A molecular dynamics study based post facto free energy analysis of the binding of bovine angiogenin with UMP and CMP ligands.
Journal: Indian journal of biochemistry & biophysics 20010101
Title: On a possible new intracellular signal-system in rat gastric mucosa.
Journal: Journal of physiology, Paris 20010101
Title: Infectious bronchitis virus nucleocapsid protein interactions with the 3' untranslated region of genomic RNA depend on uridylate bases.
Journal: Advances in experimental medicine and biology 20010101
Title: Eutectic phases in ice facilitate nonenzymatic nucleic acid synthesis.
Journal: Astrobiology 20010101
Title: Membrane-permeable dideoxyuridine 5'-monophosphate analogue inhibits human immunodeficiency virus infection.
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Title: Antibody-nucleic acid complexes. Oligo(dG)n and -(dT)n specificities associated with anti-DNA antibodies from autoimmune MRL mice.
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Title: Synthesis, structure, and antitumor and antiviral activities of a series of 5-halouridine cyclic 3',5'-monophosphates.
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Title: Synthesis and antitumor and antiviral properties of 5-alkyl-2'-deoxyuridines, 3',5'-cyclic monophosphates, and neutral cyclic triesters.
Journal: Journal of medicinal chemistry 19860401
Title: Inhibition of herpes simplex virus DNA polymerase by purine ribonucleoside monophosphates.
Journal: The Journal of biological chemistry 19860205
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