Title: Mechanistic studies of the radical SAM enzyme spore photoproduct lyase (SPL).
Journal: Biochimica et biophysica acta 20121101
Title: Initial excited-state structural dynamics of thymine derivatives.
Journal: The journal of physical chemistry. B 20120906
Title: N-h and N-C bond activation of pyrimidinic nucleobases and nucleosides promoted by an osmium polyhydride.
Journal: Inorganic chemistry 20120521
Title: Structural basis for sequence-specific DNA recognition by an Arabidopsis WRKY transcription factor.
Journal: The Journal of biological chemistry 20120302
Title: The (α-4) photoconjugates of 5-methylcytosine, 1,5-dimethylcytosine, 1-methylthymine and thymidine.
Journal: Photochemistry and photobiology 20120101
Title: Determinants of bacteriophage 933W repressor DNA binding specificity.
Journal: PloS one 20120101
Title: C(5) modified uracil derivatives showing antiproliferative and erythroid differentiation inducing activities on human chronic myelogenous leukemia K562 cells.
Journal: European journal of pharmacology 20111215
Title: A new N-methyl thymine derivative comprising a dihydroxyisobutenyl unit as ligand for thymidine kinase of herpes simplex virus type 1 (HSV-1 TK).
Journal: Bioorganic & medicinal chemistry letters 20111015
Title: Noncovalent interactions in paired DNA nucleobases investigated by terahertz spectroscopy and solid-state density functional theory.
Journal: The journal of physical chemistry. A 20110901
Title: Specific photodynamics in thymine clusters: the role of hydrogen bonding.
Journal: The journal of physical chemistry. A 20110901
Title: On the nature of the long-lived 'dark' state of isolated 1-methylthymine.
Journal: Chemphyschem : a European journal of chemical physics and physical chemistry 20110711
Title: Relationship between amino acid composition and gene expression in the mouse genome.
Journal: BMC research notes 20110101
Title: Genome wide SNP discovery, analysis and evaluation in mallard (Anas platyrhynchos).
Journal: BMC genomics 20110101
Title: The (5-4) and (6-4) adducts of 1-methylthymine and their Dewar valence isomers.
Journal: Photochemistry and photobiology 20110101
Title: A codon substitution model that incorporates the effect of the GC contents, the gene density and the density of CpG islands of human chromosomes.
Journal: BMC genomics 20110101
Title: Structural basis for sequence specific DNA binding and protein dimerization of HOXA13.
Journal: PloS one 20110101
Title: Analysis of CpG methylation sites and CGI among human papillomavirus DNA genomes.
Journal: BMC genomics 20110101
Title: DNA Interaction and DNA Cleavage Studies of a New Platinum(II) Complex Containing Aliphatic and Aromatic Dinitrogen Ligands.
Journal: Bioinorganic chemistry and applications 20110101
Title: Photoinduced ring opening reactions and subsequent thermal ring closure reactions in the thymine-ammonia system and related systems.
Journal: Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology 20100924
Title: The anionic (9-methyladenine)-(1-methylthymine) base pair solvated by formic acid. A computational and photoelectron spectroscopy study.
Journal: The journal of physical chemistry. B 20100902
Title: Structural and kinetic characterization of human deoxycytidine kinase variants able to phosphorylate 5-substituted deoxycytidine and thymidine analogues .
Journal: Biochemistry 20100810
Title: Formation of aminyl radicals on electron attachment to AZT: abstraction from the sugar phosphate backbone versus one-electron oxidation of guanine.
Journal: The journal of physical chemistry. B 20100722
Title: Ab initio investigation of the methylation and hydration effects on the electronic spectra of uracil and thymine.
Journal: Physical chemistry chemical physics : PCCP 20100521
Title: Energy barriers between H-bonded and stacked structures of 9-methyladenine...1-methylthymine and 9-methylguanine...1-methylcytosine complexes.
Journal: Chemical communications (Cambridge, England) 20100121
Title: A novel FRET pair for detection of parallel DNA triplexes by the LightCycler.
Journal: BMC biotechnology 20100101
Title: The NMR restraints grid at BMRB for 5,266 protein and nucleic acid PDB entries.
Journal: Journal of biomolecular NMR 20091201
Title: Intersystem crossing and characterization of dark states in the pyrimidine nucleobases uracil, thymine, and 1-methylthymine.
Journal: The journal of physical chemistry. A 20091029
Title: Mechanisms of base selection by human single-stranded selective monofunctional uracil-DNA glycosylase.
Journal: The Journal of biological chemistry 20090605
Title: Role of the ancillary ligands on the stabilization of the imino-oxo tautomer of 1-methylcytosine in Pt(II) complexes.
Journal: Dalton transactions (Cambridge, England : 2003) 20090407
Title: Methylation-dependent binding of the epstein-barr virus BZLF1 protein to viral promoters.
Journal: PLoS pathogens 20090301
Title: Rare tautomers of 1-methyluracil and 1-methylthymine: tuning relative stabilities through coordination to PtII complexes.
Journal: Chemistry (Weinheim an der Bergstrasse, Germany) 20090101
Title: Insights into the role of Val45 and Gln182 of Escherichia coli MutY in DNA substrate binding and specificity.
Journal: BMC biochemistry 20090101
Title: The WUS homeobox-containing (WOX) protein family.
Journal: Genome biology 20090101
Title: Multinuclear NMR and kinetic analysis of DNA interstrand cross-link formation.
Journal: Journal of the American Chemical Society 20081231
Title: Electronic and vibrational spectroscopy of 1-methylthymine and its water clusters: the dark state survives hydration.
Journal: Chemphyschem : a European journal of chemical physics and physical chemistry 20080804
Title: Patterns of evolution and host gene mimicry in influenza and other RNA viruses.
Journal: PLoS pathogens 20080601
Title: Measurement of the incorporation and repair of exogenous 5-hydroxymethyl-2'-deoxyuridine in human cells in culture using gas chromatography-negative chemical ionization-mass spectrometry.
Journal: Chemical research in toxicology 20071201
Title: Ab initio base-pairing energies of an oxidized thymine product, 5-formyluracil, with standard DNA bases at the BSSE-free DFT and MP2 theory levels.
Journal: Organic & biomolecular chemistry 20070521
Title: Theoretical model of infrared spectra of hydrogen bonds in molecular crystals and its application to interpretation of infrared spectra of 1-methylthymine.
Journal: The Journal of chemical physics 20060828
Title: Palladium(II) and platinum(II) organometallic complexes with the model nucleobase anions of thymine, uracil, and cytosine: antitumor activity and interactions with DNA of the platinum compounds.
Journal: Inorganic chemistry 20060807
Title: Vibrational Feshbach resonances in uracil and thymine.
Journal: The Journal of chemical physics 20060328
Title: DNA intramolecular triplexes containing dT --> dU substitutions: unfolding energetics and ligand binding.
Journal: Biochemistry 20060307
Title: Non-cognate enzyme-DNA complex: structural and kinetic analysis of EcoRV endonuclease bound to the EcoRI recognition site GAATTC.
Journal: Journal of molecular biology 20051118
Title: DNA adducts of the enantiomers of the Pt(II) complexes of the ahaz ligand (ahaz=3-aminohexahydroazepine) and recognition of these adducts by HMG domain proteins.
Journal: Biochemical and biophysical research communications 20050715
Title: AT base pair anions versus (9-methyl-A)(1-methyl-T) base pair anions.
Journal: Journal of the American Chemical Society 20050504
Title: Vibrational spectra of 1-methylthymine: matrix isolation, solid state and theoretical studies.
Journal: Spectrochimica acta. Part A, Molecular and biomolecular spectroscopy 20040701
Title: 5-Formyluracil-induced perturbations of DNA function.
Journal: Biochemistry 20040518
Title: A molecular dissection of the interaction between the transcription factor Gata-1 zinc finger and DNA.
Journal: Biochemical and biophysical research communications 20040409
Title: 1H NMR studies of nickel(II) complexes bound to oligonucleotides: a novel technique for distinguishing the binding locations of metal complexes in DNA.
Journal: Inorganic chemistry 20031229
Title: True stabilization energies for the optimal planar hydrogen-bonded and stacked structures of guanine...cytosine, adenine...thymine, and their 9- and 1-methyl derivatives: complete basis set calculations at the MP2 and CCSD(T) levels and comparison with experiment.
Journal: Journal of the American Chemical Society 20031217
Title: Anatomy of specific interactions between lambda repressor and operator DNA.
Journal: Proteins 20031001
Title: Reactivity of substituted charged phenyl radicals toward components of nucleic acids.
Journal: Journal of the American Chemical Society 20030226
Title: Repair of the mutagenic DNA oxidation product, 5-formyluracil.
Journal: DNA repair 20030203
Title: Pyrazolylborate-zinc-nucleobase-complexes, 3:(1) base pairing studies.
Journal: Inorganic chemistry 20021118
Title: Endogenous DNA lesions can inhibit the binding of the AP-1 (c-Jun) transcription factor.
Journal: Biochemistry 20020625
Title: Thymine-metal ion interactions: relevance for thymine quartet structures.
Journal: Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry 20010401
